Metamoodics Gene Information

 

  Chromosome: chr3    Cytoband: p26.1    Gene: GRM7

 

MD - Genomewide Association Studies for GRM7


 

View in Genome Browser

 

Description

 
Shown here are the results for gene GRM7 from a mega-analysis of major depression carried out by the Psychiatric GWAS Consortium (PGC) of 9 GWAS studies. The total sample included 9,240 MDD cases and 9,519 controls all of European ancestry with data on ~1.2M genotyped and/or imputed SNPs.

 

Details of the methods for the mega-analysis are provided here.

 

 

Results Figure

 
Download:
   
Figure Legend: A regional plot of association findings around the selected gene (+/-10Kb upstream and downstream of the union of the selected gene’s Refseq transcripts). The X-axis shows the position along the gene, the left Y-axis shows the -log10(p-value) and the right Y-axis shows the recombination rate estimated from HapMap data. Each point represents a SNP. The index SNP with the best p-value is depicted by a diamond, and the linkage disequilibrium of neighboring SNPs with the index SNP is color coded.

 

 

Results Table

 
CHR Marker pos_bp (hg18) A1 A2 INFO OR SE -LOG(10)P RSQUARE
3rs98152747504849AT0.91430.02240.8994.1920592787845(Index SNP)
3rs11064857537685CG0.9961.0770.00052493.279923427231860.67933
3rs7797417558602AC0.9971.0770.00053413.272377422030860.69282
3rs76414767519835AC0.9981.0790.00078143.107126593111230.51901
3rs8686177539303CG0.9930.93650.002022.694648630553380.67235
3rs98199877542664TG10.9370.0021072.67633546439190.65221
3rs98822787542652TC11.0670.0023262.633390289607570.65221
3rs7560847536149TG0.9950.93730.0023422.630413109263660.66123
3rs7797487551642AG0.9911.0660.0027782.55626775859840.65239
3rs7797427558058AG0.990.94020.0037212.429340329978470.65237
3rs38049287551514TC0.9740.9280.0039782.400335221211580.25603
3rs7797407558801AG0.9920.94240.0052342.281166281696140.53334
3rs7797387560070AG0.9941.060.0058932.229663558904850.60745
3rs176648337558314CG0.9931.10.0060392.219034970391680.09183
3rs119186347658434AG0.9690.94040.0096942.013496984613260.11592
3rs67786467533907TC0.9830.91640.011391.94347627592090.09183
3rs111310787523067TC0.9821.0590.01241.906578314837760.33784
3rs38049377525411AT0.9751.0590.012541.90170246350530.31125
3rs14500977520521TC0.9591.0560.015231.817300096663960.53916
3rs14501007513202TG0.9690.9490.016061.794254459057340.66101
3rs76230557485891TG0.7241.0640.016441.784098186795970.07147
3rs38049387525294TG0.9690.94690.016961.770574152079310.30494
3rs11194057521997AG0.9521.0550.017761.750557038557420.53202
3rs11194067522142CG0.9591.0530.018091.742561433140190.62503
3rs38049457514974AG0.9560.94890.020261.693360558975740.50434
3rs176651137573811TC0.9451.0790.030931.509620079996820.06393
3rs38049367528165TC0.9781.0470.035291.452348341640030.48656
3rs67899337231495TC0.540.60830.03661.436518914605590.00668
3rs176734677660663TC0.9691.0450.040441.393188853081040.00543
3rs3290447723565AC0.911.1290.048081.318035541005320.03165
3rs126392597038064AG0.8811.0660.049741.303294219066080.00562
3rs1628057695805TC0.9171.1280.05191.284832642151540.03528
3rs7797517550648TC10.95830.058151.235450280935530.50483
3rs1892597053554TC0.9180.95910.059891.222645686915790.0031
3rs76230467485856AG0.7171.0480.062981.200797343699470.00737
3rs20690627009549CG0.9461.0510.066031.180258702726990.0467
3rs7797197571446AG0.9980.95970.066661.176134690675490.41125
3rs11064867537364TC11.0410.069591.157453163504980.47324
3rs67814067370170AC0.9810.93740.075791.120388092934150.00563
3rs7797377560384TC10.96130.078321.106127321204920.41971
3rs13964007368285AG0.9841.0620.082431.08391470015630.01944
3rs9939087053628AG0.921.0390.084591.072680975040340.00239
3rs67838406890723CG0.7330.93620.085331.068898254367360.00194
3rs98169827654361TC0.9991.0370.09311.031050319018665e-05
3rs3398056896906TG0.8991.0390.094541.02438440203310.0054
3rs67660327512468AG0.9751.0880.098241.007711646202910.05376
3rs170471997367719AT0.981.0590.098731.005550862985960.01944
3rs21224177524509TC0.991.0830.10010.9995659225206810.05376
3rs14851677639334TC0.9851.0460.10030.9986990669795820.016
3rs38048577653617AG0.9961.0450.10540.9771593891234720.03171
3rs98271547621111CG0.9571.0370.10620.973875483254551e-04
3rs10216877043147TC0.931.0360.10640.9730583720409710.00657
3rs124915927369287AC0.9791.0570.11110.9542859410591320.0183
3rs13519387573417AG0.9810.96640.11140.953114809162290.38595
3rs67645617514592TC0.9960.96680.11210.9503943874050270.21606
3rs98700186902311AG0.9630.96120.11330.9457700901366030.00103
3rs38048207732870AC0.9370.92810.11720.9310723883179280.00043
3rs117131837053179TC0.9240.96620.12270.9111554372729960.00759
3rs7798677459471TC0.9861.0390.12580.900319358890750.01591
3rs98752157100372AG0.9920.95950.12750.8944898152300260.00346
3rs7127737431558TC0.9820.96430.12880.8900841369762074e-05
3rs170477947687189AG0.110.0050.13050.88438948832570.0054
3rs177240007654569AG0.9960.95960.13130.8817352739105210.03171
3rs7797607460155AC0.9630.96330.13320.8754957751657180.01133
3rs170471837364204TC0.9821.0530.13610.8661418747966650.01944
3rs7127797451597AG0.9931.0460.13670.8642314854321780.00026
3rs23240537076951AC0.9970.960.13820.859491956961820.00669
3rs67716067060713TC0.8650.95870.13890.8572977542623840.00747
3rs13919387076475AG0.9550.95960.14110.8504729862456520.01667
3rs46861157079505AG11.0410.14220.8471004036062520.0068
3rs124946547508393TC0.9641.0320.14450.8401321529074330.21709
3rs16057047372177TC0.9741.0350.14560.8368386250229820.00726
3rs7127687419456AG0.9110.96420.14620.8350526273781580.01202
3rs414809467021445CG0.9370.96040.14740.8315025164769670.03757
3rs76285047365577AG0.9811.0380.14950.8253588073395520.00768
3rs38048507663702TC0.9430.9640.14980.8244881866365520.00511
3rs119240257665542AG0.9530.96420.15360.8136087843045070.00352
3rs38048227724419TC0.941.070.1540.8124792791635370.00043
3rs14851797578708TC0.9440.96950.15770.8021683066710970.03022
3rs119239987213041CG0.4671.5520.15970.7966950838615170.01056
3rs7127717421433TC0.9150.96580.16220.7899491501248630.00861
3rs7127827456801AG0.9970.95890.16360.7862167006646960.00026
3rs105103597348336AC0.950.95240.16470.7833064008302460.01944
3rs19951947403082TC0.9670.95890.16910.7718563924022580.01181
3rs130757947511624AG0.9730.97080.16960.7705741520793050.18987
3rs7797467553531TC0.9951.030.1730.7619538968712050.45447
3rs170476767602754TC0.3490.61650.17320.7614521123186720.00688
3rs7127927467779AG0.9751.0340.17650.7532552902761590.00672
3rs73407517389354AC11.0290.1780.7495799976911060.04011
3rs64431067371602TC0.9861.0350.17990.7449688366544490.00496
3rs172350397193700TG0.7350.94770.18360.7361273231347760.00164
3rs7797247473258AG0.9860.96860.18670.7288556820509220.00062
3rs98286917521043CG0.8720.9560.19150.7178312216953580.19184
3rs38049257555979AG0.9510.95660.19160.7176044952574740.12565
3rs98602747648242AC0.9891.0290.19310.7142177262206050.00051
3rs7127767438316TC0.990.96920.19310.7142177262206050.00344
3rs14991457078082AT0.9891.0360.19330.7137681459714470.00709
3rs98295687667186AC0.9640.9690.19550.7088532382681140.00559
3rs21167116943207AG0.9890.95520.19670.7061956400806630.00208
3rs170470717323129TC0.8460.95310.1970.7055337738384070.00379
3rs9651707189563TC0.9631.0320.19890.7013652168755640.00025
3rs102225877508618TC0.9111.0450.20.6989700043360190.18751
3rs37924387679993TC0.9511.0290.20020.69853592685670.00095
3rs98750417100230AC10.9730.20210.6944336864846961e-05
3rs176936796947512AG0.9771.0470.20310.6922900765951930.00267
3rs46861147079272TC10.96610.20350.6914355864387610.00413
3rs9655957540092AG10.9730.20850.6808939406902240.35711
3rs38048497674439AG0.9610.97120.21030.6771607273136790.00808
3rs14991617020455AC0.9910.97380.21170.6742791419805880.02344
3rs98126307099872AG11.0270.21190.6738690432892051e-05
3rs7127777438958AG0.9831.030.21380.6699922991272410.0047
3rs38048867611612CG0.9911.0330.21540.6667543010380370.04872
3rs7127787443858TC0.9771.030.21710.663340176545580.00263
3rs15325447027752TC0.9481.0360.21850.6605485586935590.04296
3rs104908617004628AG0.8830.93680.21980.6579723119125280.02044
3rs38048837614708AG11.0290.22020.6571826853642670.03861
3rs7797497551541TC0.9770.97350.22130.6550185860727420.35829
3rs105103707642672AT0.9910.96650.22270.6522797829659620.03171
3rs76515916898647TC0.8410.95620.22290.6518899315197620.00096
3rs98637647398494TG0.8440.95630.22360.6505282007856140.02142
3rs4782506980445AG0.8050.96680.22380.6501399178076690.00915
3rs18749657087861AC0.9741.0350.22530.6472388082761690.00662
3rs10666587420630TC0.9111.0280.22550.6468534537860210
3rs98165837100091AG11.0260.22590.6460837690796371e-05
3rs3380897023976AG0.9970.97470.22720.6435916729610190.02463
3rs177232897641994CG0.9921.0340.22740.6432095396482840.03171
3rs3420346878601AG0.1471.1570.22960.6390281162740640.00099
3rs11440117535059CG0.9850.97410.230.6382721639824070.35829
3rs38048697640463AG0.9931.0340.23070.6369524054789070.03171
3rs20141957014450TC0.9430.97030.23210.6343248595440820.0448
3rs176661407609675TG0.9920.96930.23350.6317131150978690.04872
3rs124871777374067TG0.9770.970.23610.6269040129212730.0126
3rs13538317085195AC0.9981.0330.23720.6248853153077750.0068
3rs8707397230106AG0.4821.3090.240.6197887582883940.00685
3rs7797237473342TG0.9810.96950.24130.6174426780912140.00212
3rs13919497033682TG0.9770.97530.2440.6126101736612710.0035
3rs7127757433710TC0.9891.0280.24630.6085355881608970.00448
3rs73745537503503AG0.8061.0290.24950.6029294500405910.00229
3rs14002887009063AC0.8891.0630.25260.5975666537806880.02044
3rs7127747431675TC0.981.0280.2530.5968794788241820.0073
3rs68085547003319TC0.7411.0470.25330.5963648102094520.00091
3rs46861317523933AC0.941.040.25340.5961933894525770.18751
3rs7127857460714CG0.9740.96570.26070.5838589688316710.00349
3rs6873386956134AG0.9850.97260.2620.5816987086802550.00453
3rs13759197476010AG0.9691.0360.26290.5802094138936370.00519
3rs76255327102850TC11.0240.27040.5679933127304022e-05
3rs76472827387044TG0.9851.0240.27070.5675117442294940.02624
3rs176936186946349AG0.9770.96110.27140.5663901566762820.00267
3rs117154557672052CG0.9331.0240.27140.5663901566762820.00131
3rs38284247706306TC0.9661.0650.27170.5659103615821090.0137
3rs11543587010178AG0.9261.0250.27440.5616158929652860.0247
3rs38048677642909TC0.9960.970.27620.5587763257573880.04834
3rs76472767387023TC0.9841.0240.2770.5575202309355510.02624
3rs130725187106501TG1.011.0230.27780.5562677585984030.00094
3rs37924527641784TC1.010.97120.27980.5531522898441910.04271
3rs170475037532251AG0.9850.96910.28020.5525318690502440.02076
3rs14001637185728AG0.9441.0240.28170.5502131530142270.00164
3rs98762416911053TC0.9880.96630.28250.5489815478445430.00062
3rs130805947378646TC0.9350.97680.28730.5416643740080530.02725
3rs124862716959448TC0.9831.0390.28750.5413621509743510.00208
3rs64430817105085TC1.010.97780.28840.5400047439526090.00195
3rs7797337502372TG0.7880.9720.30070.5218665718994820.00208
3rs130641537400658TC0.9090.95590.30250.5192746210115120.01923
3rs170477547653134TC10.97560.30850.5107448316307390.06013
3rs172885617187607TC0.9481.0230.30930.5096200799968210.00571
3rs7813886993932TC0.7831.0250.32220.4918744639168010.00367
3rs13919507033417TC0.9870.97930.32890.4829361265173450.00269
3rs11437407577077TC0.9081.0220.3370.4723700991286610.27856
3rs3380927021853AG0.7630.86420.33940.4692881620183430.00668
3rs38049597491145TC0.8651.0230.34350.4640732586044310.00564
3rs98193147656695AC10.97930.35210.4533339749298160.03724
3rs6707647001341AG0.9921.020.35310.4521022824369030.0231
3rs7523007495084TC0.8970.97770.35330.4518563625651540.00012
3rs14990777399340AC0.8691.0210.35330.4518563625651540.00141
3rs20557377268469TC0.9631.0220.3630.4400933749638880.02958
3rs117194767751769AC0.9720.97460.3630.4400933749638882e-05
3rs105103697624026TC11.0280.36840.4336803784751890.02298
3rs11138107146584AC0.3020.03070.37010.4316809149048880.01422
3rs108660787190759TC0.9370.97870.37160.4299242946783960.00011
3rs119177817712498AT0.9340.95680.37380.4273607029571870.00015
3rs7797067499042CG0.860.97870.38080.4193030602875630.00538
3rs38640707666250TC0.9770.9810.38440.4152166210034920.01031
3rs13919017492340AG0.8860.97890.38450.415103655862550.00012
3rs7127867461021AG0.9660.97640.38830.4108326094539525e-05
3rs64144577013511CG0.6271.1510.38880.4102737437457630.00668
3rs7797017493772AG0.8771.0210.38960.4093810517934220.0075
3rs7813936986534TC0.8430.97620.3950.403402904373540.00052
3rs1628007699868TC0.9740.9820.39630.401975927665810.01787
3rs67733346887613TC0.8221.0320.39790.4002260608536120.0353
3rs93119757080375TC0.9951.0180.3980.4001169279263120.011
3rs74282717065422TC0.9621.0180.39930.3987006898056620.00019
3rs170475907574226AT0.9540.97110.40220.3955579337392770.00185
3rs18723947655566TC1.010.98150.40340.3942641061232530.03724
3rs117132667620217TG1.010.97560.40550.3920091414528250.01872
3rs7796947496741CG0.8881.020.40590.3915809486827150.00538
3rs18474347751418AG0.9771.0210.40640.3910463007241370.01727
3rs23241227389789AG0.991.0180.40820.3891269996199480.03344
3rs98593436930371TG0.9861.0440.41070.3864752971463480.00031
3rs8026466953547TC0.9471.020.41160.3855246339096050.02124
3rs7797057499103TC0.8661.020.41540.381533507800920.00538
3rs68080507751639TG0.970.97990.41580.381115515004550.01783
3rs7127937468351AG0.9830.98230.41780.379031564355710
3rs5475416943137AG0.9380.98230.41950.3772680348352810.00165
3rs7796937497091TC0.8791.020.42180.3748934245965320.00538
3rs177524447013214AG0.9511.0220.42340.3732491463166070.00288
3rs76120487653090AG11.0180.42450.3721223054200280.03345
3rs98386477665439AG0.9671.0180.42880.3677452233152860.02575
3rs415110467296712TC0.721.0840.42970.3668346463160970.01342
3rs117067527509946AG0.9390.98270.43160.3649185639891270.12933
3rs64431187649009TC11.0180.43380.3627104523218260.03345
3rs130812177512278AG0.9680.98310.43820.3583276267753130.1214
3rs170478747750834AG0.9381.020.43840.3581294545236870.0071
3rs38640677652215AG10.98280.43930.357238796734680.03345
3rs4651526894079AG0.8530.98240.44530.3513473048687770.00393
3rs18177017758784AG0.970.98140.4490.3477536589966770.011
3rs11451417579955AG0.9171.0240.44970.3470771124320580.01507
3rs170462246885125AG0.9641.0320.45510.3418931644936070.0013
3rs68063177759626AG0.9811.0190.45750.3396089015975330.01727
3rs5769137001696TC0.9460.97870.46570.3318937620672690.0039
3rs176972877324755AG0.9850.98450.46580.3318005158013380.04189
3rs9497317327379AG0.9840.98450.46840.3293831135996740.03555
3rs5777797000583TC0.9331.0220.46870.329105046479790.00481
3rs93119947646655TG0.9931.0210.46980.3280869875584130.02006
3rs64430746882193AG0.8050.96970.47340.3247717464069360.01342
3rs38640747676440TG0.9730.98490.48070.3181258778713530.00363
3rs170462316888374TC0.9660.97070.48130.3175841383226410.0013
3rs119157896925603AT0.8270.9330.48230.3166827380781170.01078
3rs98284687767544AC0.9740.98280.48470.3145269802772410.01508
3rs14991467078950CG0.9680.98510.48640.3130064337353217e-05
3rs93119767097638AG0.991.0170.4880.3115801779972891e-05
3rs37924517647002TG0.9420.98290.48850.3111354319452080.02567
3rs98532837145586AC0.6750.87830.49170.3082997917098390.01078
3rs98201536925739AT0.9821.0370.4920.308034897232640.00031
3rs15163027183953AG0.9860.98410.49530.3051316720175440.00935
3rs1633266974617AG0.9851.0150.49590.304605891708890.00151
3rs124892246898508AG0.8020.97460.49610.3044307729638140.03701
3rs119210836929873TC0.9940.98420.49760.3031196283172380.00031
3rs98603957693570TC0.9270.96460.49810.3026834582676170.0025
3rs119192927086392TC0.9321.030.49820.3025962767995120.02538
3rs7127526999127AG0.9270.98320.50130.2999022953869460.0012
3rs177004707426750AG0.931.0150.5020.2992962828549810.00314
3rs1634206975074TC0.9691.0150.50480.2968806537639220.00151
3rs1914436897000TC0.931.0160.50560.2961929347256710.01655
3rs46861016981880AG0.990.98590.50640.2955063029907010.00062
3rs7797147484984TC0.9690.98060.50790.2942217871714020.01108
3rs38048687642586TG0.9771.0190.50870.2935382623686450.02271
3rs98819087670065AG0.9550.98560.51060.2919191895317680.00041
3rs67691157114845TC0.5711.1960.51370.2892904342756630.00343
3rs170478347722072AG0.3021.5320.51480.2883614617676510.0054
3rs98385067754295TC0.3451.5790.51510.2881084501194210.0054
3rs3390206948116TG0.9931.0170.51510.2881084501194210.01239
3rs98265797757371TC0.9451.0160.51540.2878555857851140.02
3rs76444366925189AC0.9660.98090.51550.2877713303804653e-04
3rs14991437073894AG0.6180.91110.51590.2874344721266926e-05
3rs38048597653340TG0.9970.98090.51670.2867615384543380.0069
3rs23242097685841CG0.9551.0360.51930.2845816774049441e-04
3rs15663687059277AT0.7040.98380.52050.2835792661534450.01201
3rs23240467008701TG0.8681.0150.5210.2831622767004760.01351
3rs1627237744798TC0.9521.0180.52270.2817474999022499e-05
3rs67978527237014AG0.8750.97930.52390.2807516015520540.0238
3rs415344487113976AG0.9681.0310.52390.2807516015520540.00118
3rs37924547618580AG0.961.0140.52430.2804201422862770.00542
3rs98702417685922TC0.9291.0350.52440.2803373169819531e-04
3rs4149076886425AG0.8170.98420.5260.2790142558462610.00178
3rs126347887345609TC0.3871.2820.5260.2790142558462610.01036
3rs98771497146036AG0.4091.1310.52710.2781069837850430.01078
3rs98489737095529AG0.9980.98670.52760.2776952131256720.0012
3rs7797087487728AG0.9680.98530.52980.2758880460387880.00626
3rs11543597011256CG0.9031.0140.53310.2731913174750360.02518
3rs9243537526114TC0.9730.98670.53410.2723774220308630.09029
3rs9832557530753AG0.9890.97150.53820.2690563065722640.03342
3rs18723967655452AG0.9971.0190.53890.2684918164039750.00712
3rs76216337347619TC0.5381.0210.54020.2674454201485680.00436
3rs67779707085108AG0.9310.97190.54130.2665619729089390.01531
3rs176623227484288TC0.9571.0170.54330.2649602949662790.0029
3rs68043007111324AG0.9751.0290.54950.2600323032404910.0012
3rs130705037234357AC0.9241.0160.55050.2592426766922290.00102
3rs14992097393725TC0.8840.98650.55210.2579822528598620.06902
3rs104908576934982AG11.0190.55250.2576677176428520.00215
3rs4804096985081TC0.7210.98130.55470.2559418341211650.01197
3rs2349986947746AG0.9880.98470.55510.2556287726681390.01239
3rs177188677484265TC0.9571.0170.56090.2511145599904830.0029
3rs1622097716897AG0.9951.0130.5640.2487208960166580.01185
3rs176943216969953AG0.9940.98570.56610.2471068451154060.00398
3rs18723977655410AG11.0170.56710.2463403527140010.0069
3rs98831426992919TC0.6030.98280.56780.2458046118101620.00802
3rs21334507311452AC0.951.0120.57030.2438966284148940.04053
3rs3398046897197AG0.8670.98630.57290.2419211777503870
3rs15087237216488AG0.1432.1920.57290.2419211777503870.00269
3rs10838017498498AG0.8440.98590.57570.2398037705448660.0108
3rs37924397670640TC0.9751.0120.57610.2395021247734730.00136
3rs98560687100486AC0.9560.97450.5770.2388241868442690.00649
3rs413221536937448AG0.7140.91820.57930.2370964715009430.00549
3rs19652227578194TC0.9770.98240.57950.2369465597003850.07015
3rs19951997126264CG0.9831.0120.5830.2343314452409868e-04
3rs170462916911832TC0.9810.96990.58840.2303273359445070.01756
3rs28752577196090AG0.9881.0130.5890.2298847052128980.02368
3rs98564617401507AC0.8991.0130.58970.2293688722221935e-04
3rs3390216947065AT0.9910.98630.59530.2252641174482470.01239
3rs119288657130702AT0.9941.0130.59550.2251182341812040.009
3rs67821637165127AG0.9551.0730.59720.2238802009470120.01376
3rs170462396891027TC0.7070.96720.59720.2238802009470127e-05
3rs130974827499513TG0.8420.98440.59730.2238074852529280.0027
3rs22807397696997AG0.9631.020.59810.2232261975878930.01532
3rs76426407502509TG0.640.88270.59850.2229358452575710.00813
3rs119222657081370AG0.9250.97770.60210.2203313727928520.01734
3rs64431007308382AC0.9741.0110.60330.2194666746835960.01518
3rs45742817672326TC0.9510.98880.60390.2190349703916830.00169
3rs170462456891326AT0.7041.0330.60540.2179575833794467e-05
3rs67664797299186CG0.9791.0110.60760.2163822348092510.03283
3rs9639226898489CG0.9170.98820.60990.2147413666422990.01632
3rs76221817255099AG0.1362.3360.61370.2120438767160680.00343
3rs98136787124645AG1.011.0110.61570.2106308464085180.00142
3rs3290437724114TC0.9771.0110.61750.2093630380682970.03385
3rs1627837706869AC11.0110.61760.209292712672320.01901
3rs105146627066338AG0.860.97630.61810.2089412564081750.00443
3rs14991537123907TC1.011.0110.61830.2088007535011250.00142
3rs67723337091696AG0.9971.0120.61930.2080989199904290.00943
3rs15040477723843TG0.9940.98940.61930.2080989199904290.01445
3rs14851717626185AC0.9741.0150.62030.2073982188350340.00349
3rs64430927159996TC1.011.010.62190.2062794431864770.00876
3rs98702247710075TC0.9531.0240.62210.206139798657332e-04
3rs15692847582044TC0.9510.98910.62520.2039810306528510.08345
3rs1828856938757TC0.911.0120.62870.2015565396498130.00905
3rs98693947164038AG0.7511.0660.62930.2011422682525140.01599
3rs98293987286253TC0.9870.98970.630.2006594505464180.03443
3rs64144607239504AT0.9171.0110.63090.2000394725940160.03153
3rs67687507215675AG0.991.0110.63170.1994891231056320.00367
3rs67654827143677TC0.9920.98990.63170.1994891231056320.02285
3rs105103667390452AG0.9931.0140.63220.1991455084964390.01078
3rs130704767234313AG0.9751.0120.6360.1965428843515860.0026
3rs170477347637963AG0.9771.0210.63610.1964746044234680.00909
3rs1627727714919TG0.9830.990.63660.1961333657150160.03537
3rs38048967600807AG0.9980.9890.63670.1960651501361580.06537
3rs67843177197236TG0.9881.0110.63710.1957923949179590.02483
3rs105103547227190CG10.98980.63750.1955198108940070.00858
3rs178248727124562AG11.0120.63940.1942273680643310.0037
3rs170475827566405AG0.9980.98420.6420.1924649719311470.00331
3rs68101417358890TC0.971.010.64340.1915189434340490.07513
3rs21637356970426AG0.9241.0160.64410.1910467008440890.00144
3rs67825287696032AT0.9571.010.64960.1873539837668810.01045
3rs98832587394156AG0.9010.98840.65220.1856192055300620.00121
3rs98566556917072AC0.9710.98590.65390.1844886626372360.00386
3rs1627857702101TC0.9760.99050.65640.1828314276189440.01771
3rs105103447064629TC0.9150.97920.65650.1827652695745020.01531
3rs104908566935437TC0.8551.0360.65680.1825668558886160.01035
3rs22918677315164AG0.9640.99030.65840.1815101777957870.00972
3rs133210207666088TC0.8910.97910.66140.1795358094223160.00673
3rs124894047321698TC0.9880.99050.66140.1795358094223160.01919
3rs170470737324612AG0.9861.010.66180.1792732371761660.01919
3rs3420266883535AG0.9261.0110.66360.1780936226476770.00721
3rs76150667089591TG0.991.010.66570.1767214430483290.01026
3rs117107157136276TC0.9891.0090.66720.1757439623703180.02377
3rs76320447310947CG10.98740.66770.1754186237665170.01824
3rs76352127303063AG0.9690.99060.66980.1740548567961520.01594
3rs39124497658162AG0.9880.98730.67030.1737307806062740.00713
3rs18576977733107TC0.9860.99090.6720.1726307269461750.00764
3rs18686177480468AG0.9680.98560.67270.1721785723171980.00157
3rs1618877748682AG0.9740.99030.67380.1714689933548990.00142
3rs38048437690397TG0.9571.0230.67630.1698606125746571e-04
3rs3329367728473AG0.9661.0090.67640.1697964010742960.00038
3rs104908586934514TC0.850.96740.67730.1692189243936390.01035
3rs170318477151907AG0.8430.94670.67740.1691548076913890.01367
3rs98379897117307TC0.9730.99090.68040.1672356950594697e-05
3rs105103567325877CG0.9860.99110.68180.1663430031071280.01919
3rs76215377347535CG0.5081.0120.68190.1662793095553670.00198
3rs13544047706964TC0.9910.990.68280.1657064875573040.00503
3rs4842836986962TC0.7020.98340.68340.1653250255372560.00423
3rs67854257100901AG0.9751.0190.68510.1642460324806170.00649
3rs13544077733042AG0.990.99130.68580.1638025192210750.01101
3rs121072247638718TC0.9921.0180.68590.1637391971415130.00909
3rs18781647148002AG0.9841.0090.68690.1631064836235660.0126
3rs1627227745147TC0.9491.010.690.1611509092627450.00659
3rs117177507439013TC0.9941.0080.69270.1594548123631610.00168
3rs13544057706991AG0.9981.010.69320.1591414459581210.00574
3rs76245257709428AC0.9981.010.69380.1587657044939590.00574
3rs67644117118551TG0.9810.99150.6960.1573907603894384e-05
3rs117067327685584AT0.9331.0090.69650.1570788792400180.0082
3rs98739057274331TC0.9391.0090.6970.1567672219019910.01989
3rs76282947300375AG0.9680.99140.69750.1564557880543650.01735
3rs3930466889137TC0.9130.99090.6980.1561445773768390.0058
3rs100847627331888TC0.2550.86450.70090.1543439400164560.01036
3rs44148387672810TC0.991.0090.70150.1539723246356210.0159
3rs413615517687944TC0.9551.0210.70190.1537247575877871e-04
3rs13538287144453AC0.9990.99090.70320.1529211379342850.01164
3rs413464447316994TC0.9691.0080.70570.1513798825658660.01919
3rs5073856985717AT0.6860.9840.70660.1508263669011730.00484
3rs67993297641694AG0.9960.99190.7070.1505805862031010.0384
3rs73405247389506AG0.9881.0080.70850.1496601454165210.0637
3rs37494507163063TC0.9830.99140.70860.1495988520028420.00045
3rs76468447132733TG0.9721.010.71190.1475810070629990.00976
3rs19010467439414AG0.990.99210.71190.1475810070629990.00307
3rs98378347117227TC0.9790.9920.71310.1468495635521571e-05
3rs1627777711246TC0.991.0080.71420.1461801541432370.01745
3rs130714627389225TC0.9860.99210.71440.146058554119510.04408
3rs46861487663662TG0.9141.0090.71470.1458762178988330.00671
3rs15680757157917TG0.990.99220.71630.1449050488413780.00535
3rs11543526988463AG0.5331.0110.7180.14387555575770.00227
3rs5036166985284TG0.7351.0140.71830.1436941335667013e-05
3rs98518497236964AG0.9181.0080.72110.1420045044390760.02661
3rs98828656913008AG11.0090.72170.1416432947022270.00047
3rs38049087594230TG0.9960.99170.72370.1404414273739460.05849
3rs105103537196165AG0.9850.99190.72560.1393027259479610.02368
3rs98204177079786AG0.9941.0090.72910.1372129017646560.00021
3rs16678506978531AG0.9531.0090.73010.1366176515592120.00719
3rs178248667079822TC11.0090.73250.1351923709738532e-05
3rs76172977365780AC0.990.99240.73870.1315319009790130.02891
3rs98264247596512TC1.010.99230.74060.1304162922865760.05849
3rs76521547234684AG0.9670.99270.7410.1301817920206720.01579
3rs40950957284658AG0.9481.0080.74150.1298888446355990.02271
3rs177514396985587TC0.7781.0410.74170.1297717209882060.01087
3rs98679707120862AG0.8850.93660.74190.129654628919040.00668
3rs98605807267607TC0.990.99290.74230.1294205394473150.03704
3rs28752377332086AG0.9841.010.74230.1294205394473150.02349
3rs15165706980021AG0.7911.0090.74320.1288942990144150.01144
3rs124959717143913CG0.9980.99210.74410.1283686954624460.00571
3rs98263417107442CG0.9881.0070.74460.1280769681176276e-05
3rs38284727163006AC10.99250.74460.1280769681176270.00045
3rs178249087151252AG10.99220.74510.1277854366024140.00608
3rs126303006899680TC0.4271.0230.74560.1274941006540755e-05
3rs98158327152929TC0.9841.0080.74650.1269701879389560.0085
3rs172348867067021CG0.9881.0080.74830.1259242547769650.0011
3rs38049067596654AC10.99250.74880.1256341642699510.05849
3rs14001657243362CG0.9381.0070.74970.1251124891538880.02753
3rs67990237641413AG0.9930.99310.75080.1244757360506910.0277
3rs413861457417457TG0.2820.91490.75090.1244178956721140.0054
3rs14991477061757TG0.9311.0080.75170.1239554497539050.00494
3rs46861467663564TG0.9070.99260.75230.1236089381808120.0076
3rs67963246987842AG0.7761.0110.75330.1230320325674150.0027
3rs18766147296289AG1.021.0090.75460.1222831991350230.01824
3rs111310637142701AG0.9991.0080.75640.1212484798269980.00737
3rs98433107153168TC0.9760.99260.75770.1205027127505710.00857
3rs98771937669402AG0.9451.0070.75790.1203880929341490.01495
3rs172348797066501TC0.9931.0080.75830.1201589440134370.00163
3rs13562686996095AG0.791.0180.76040.1189578918065940.01883
3rs3390226946989AG0.990.9930.76260.1177031990623480.01067
3rs13538327058814TC0.4991.0110.76380.1170203459627010.01
3rs37924607597270TC1.011.0070.76560.1159980752312130.05849
3rs98148097145741CG0.9941.0070.76780.1147518922186140.0063
3rs119284687215561TC0.5020.81680.76920.1139607244335580.00321
3rs1627847706411AC0.970.98840.76990.1135656803710620.00735
3rs76152547089784TC0.9991.0080.77090.1130019543289010
3rs11543657029152AG0.5711.0090.77120.1128329791052260.03342
3rs9084657258715TG0.9990.99160.77140.1127203654699770.01045
3rs170464726975708AG0.8481.0090.77240.1121577348926430
3rs38049047596977TG1.010.99340.77630.1099704138365830.05849
3rs177179597456854TC0.9881.0060.77640.1099144732836750.00197
3rs98693087196317TG0.1050.59620.77650.1098585399354230.00688
3rs22798407710770TC0.941.0070.780.107905397309520.00308
3rs170467497079005AG0.7570.96330.78220.1066821883838880.00688
3rs98198007153157TC0.9981.0070.78390.1057393355530120.00796
3rs38049687477700TC0.9681.0060.78390.1057393355530120.00734
3rs124976166958750AG0.9820.99270.78660.1042460579262720.00689
3rs98227967751303AT0.210.84860.78760.1036942925339190.0054
3rs117109467221241TC10.99410.78790.1035288995207230.00858
3rs18749817147721TC0.9161.0090.78870.1030881591739750.00028
3rs170464156955293TC0.8481.0090.78880.1030330980668450.00213
3rs7797107486375TC0.8481.0060.79230.1011103440734140.00447
3rs13964027305517TC10.99240.79340.1005078038618680.01277
3rs172349837164058AC0.9990.99420.79660.09875969792669080.00035
3rs38048377700102TC0.2511.2980.79670.09870518283443280.00321
3rs76519716868897TC0.8520.9940.79780.09810596802617920.00453
3rs46861026981960TC0.7820.96980.79880.0975619438013350.01099
3rs67911117364984TG0.9740.99460.79920.09734452478207410.04639
3rs67874747165389TC0.9940.99460.79970.09707290398273710.00508
3rs8704407259458TC0.9990.99280.80140.0961506619033190.01045
3rs14990797408728TG0.5060.98620.80480.09431203228814783e-05
3rs64430907143009CG0.9660.99320.80490.09425807260839860.00976
3rs67704467160627TC0.9910.99440.80690.09318028453345467e-05
3rs170467307068553TC0.9231.0110.80770.09274991711867160.02136
3rs170478867755116TC0.9660.98990.80850.09231997575758010.03319
3rs76271797164372AG0.9970.99490.80950.09178314691060750.00508
3rs170463226927739AG0.9670.98640.80950.09178314691060750.01424
3rs1627797709742TG0.9730.99040.810.09151498112135020.00743
3rs76177537170159TC0.9451.0070.81070.09113982698272350.00649
3rs98294957243094TG0.9371.0050.81140.09076499663169260.01853
3rs98804047150878TC11.0060.81330.0897492276998520.00796
3rs15087227357827TC0.9881.0050.81610.08825662214406830.04103
3rs20070297260685AG0.9771.0070.81620.08820340956274790.01918
3rs67666867145011AG0.9630.99370.81650.0880438109273130.00928
3rs18103207258969AG0.9940.99340.81750.08751223866767630.00628
3rs68044667155162TC0.9951.0060.81810.08719360733870770.00796
3rs176554117436706AT0.9661.0070.82130.08549817717268590.00024
3rs172349907170141TC0.9950.99490.8230.08460016478773020.00034
3rs1628027696613TC0.9611.0050.82320.08449463824562350.01693
3rs3329387728230TC0.981.0050.82360.08428366205400620.00038
3rs67754247423339AG0.9521.0050.82560.08323031571686390.00041
3rs67882017101102TC0.8371.0440.82620.08291480935943270.00668
3rs98663937329377AG0.4611.1590.82680.08259953204474940.00688
3rs15692857582033AG0.9470.9950.82680.08259953204474940.06212
3rs124875037456068AT0.9851.0050.82780.08207457793525880.00195
3rs67953977200763AG0.9890.99510.82940.08123596897200090.03139
3rs3290377738386AC0.9831.0050.8320.07987667370927610.00065
3rs117080197204619AG0.991.0050.83280.07945928349752030.03006
3rs120538647094708AG0.960.99080.83670.07743023101428770.01361
3rs37493806878297TC0.6181.0060.83770.07691148455760070.00455
3rs14851707629492AG0.9410.99550.84010.07566901529132160.04159
3rs68019707001273CG0.8581.0050.84170.07484267282410150.04191
3rs19952007126125TC0.9780.99370.84180.07479107858799652e-05
3rs14851747595828AG0.9911.0050.84180.07479107858799650.00762
3rs38640777715163TC0.9920.99480.84290.07422394616325370.00493
3rs176555607441155CG0.9720.99570.84310.07412091069849920.00145
3rs67780307128652AG0.9890.99590.84740.07191154033502920.01103
3rs41435167599941TC0.9930.99550.84810.0715529367908180.01128
3rs76429467340494AG0.9731.0040.84870.07124579782334680.03711
3rs124874947442697AG0.9821.0040.84870.07124579782334680
3rs105103717720206TC0.7980.98090.850.07058107428570730.00373
3rs21361527257402AC0.9991.0050.85260.06925467168888660.01323
3rs76342627271784TC10.99470.85450.06828793294324440.01569
3rs93119867344342CG0.9690.9960.85570.06767846801070680.03832
3rs130667507413708AG0.9561.0040.85730.06686717627326570.00779
3rs76242647163629AG0.9840.99520.85750.06676587128519190.00536
3rs176568317483738AG0.950.9950.85830.06636088747507490.00309
3rs119294947748877TC0.940.99240.85960.06570359318059430.03319
3rs18180337177533CG0.7210.99530.86070.06514819703433920.00018
3rs76131257059945AG0.8441.0070.8710.05998184499233680.02136
3rs76149157595382TC0.9891.0040.87150.0597326085539880.01198
3rs98466377424156CG0.9231.0040.87210.05943371350990980.01757
3rs176978537341195TC0.9840.99650.87280.05908526241971450.03711
3rs67962077165475AG0.9921.0040.87360.0586873746393380.00175
3rs14992047412037CG0.9480.99650.8740.0584885673655970.00894
3rs176647927556437AG0.8310.99370.87470.05814087347462650.04599
3rs126374667296909AG0.980.99660.87480.05809122563440050.03982
3rs98820586912327TC0.9891.0040.87680.05709945885970610.00369
3rs178250347224845TC0.9750.99660.87810.05645602284654560.0068
3rs176979287342771TC0.9841.0030.87880.05610995175152730.03711
3rs98675667343673TC0.9840.99670.87920.05591232058456580.03736
3rs10392637384970TG0.9731.0030.87920.05591232058456580.04483
3rs37494497163072AG0.9830.99590.880.05551732784983140.00536
3rs117156817197094AG0.9831.0030.88630.05241925069567750.03006
3rs98114897345789AG0.9660.99690.88710.05202742075421990.04245
3rs14851727596158TC0.9951.0030.8880.0515870342213990.01357
3rs98118207343718AG0.9131.0150.88870.05124481983173020.00057
3rs1628087693212AC0.9630.9970.89030.05046362662385740.01742
3rs67698147226433AG11.0030.89080.05021979163799940.02788
3rs15087087339572AG0.9830.99710.89160.04982994019179990.0256
3rs93119666930734TC0.9630.99710.89370.0488082420652940.00614
3rs14992107346835AG0.9610.99710.89370.0488082420652940.05181
3rs133237897167413TG0.9670.99640.89540.04798290995257370.016
3rs105103607348362AG0.9531.0140.89610.04764352267620930.01087
3rs105103687601354TC0.9941.0030.89660.04740126547022690.01422
3rs14991997361444TG0.9651.0030.90020.04566099139753990.03898
3rs98480067269776AC11.0040.90190.04484161307420640.01123
3rs117197107380534TC0.9720.99740.90240.04460091336073290.04483
3rs76459787172715AG0.9081.0060.90330.04416798976757820.00488
3rs98365387362400CG0.9861.0030.90650.04263219156847250.04103
3rs14724767027542TC1.010.99720.90750.04215336629184990.00117
3rs170471497355288TC0.961.0120.90760.04210551278710160.01087
3rs18724007599974TC0.9951.0020.90930.04129280891271530.01115
3rs15087247216745AG0.9791.0030.90960.04114954832032160.01444
3rs111310697361487CG0.9590.99680.910.04095860767890640.00224
3rs98370197362710TC0.9860.99760.91080.04057697805689480.04103
3rs64431097447061AG0.9821.0020.91240.0398147233953890.00074
3rs176526147346919AG0.9191.0020.91540.03838909190871930.04383
3rs37494487163116AG0.9841.0030.91550.03834165136228470.00548
3rs64431047338887AG0.981.0020.91670.0377727686499150.0081
3rs9515577244035TC0.9430.99780.91850.03692083935817290.022
3rs98291417333130AG0.9320.98920.91880.03677901347701150.00057
3rs38048077753513AG0.9511.0040.91960.03640103740275860.028
3rs105103647356271AG0.9891.0030.92120.03564607070780650.00326
3rs37924767479862TC0.9670.99780.92280.03489241415094410.00011
3rs127156017201806AG0.9720.99780.92330.03465716443937790.03881
3rs133268117206860AT0.9940.99790.92430.03418704696339690.02586
3rs67777017128339AG0.9690.9980.92480.03395217892354620.00657
3rs18686167480487AG0.970.99740.92720.03282657704446040.00016
3rs1628107691889AG0.9711.0020.93190.03063068826647250.026
3rs21361517328870AC0.980.99820.93320.0300252698782850.00812
3rs124890417412599AG0.9450.99820.93350.02988567771490290.00314
3rs14851757595789TC0.9951.0020.93460.02937422331170550.00989
3rs67639697286647TG0.9941.0020.93570.02886337052319380.00679
3rs14729127247914AG0.9451.0020.93730.02812138297373420.022
3rs7132917473748AG0.9771.0020.93970.02701077314465120.00149
3rs38049677479914TC0.9731.0020.93970.02701077314465120.00153
3rs117122657454889AG0.9850.99780.94230.02581080888183280.00189
3rs117174717599469TC0.9940.99830.94260.0256725645763830.01152
3rs3290387691660AG0.9621.0020.94510.02452223683412540.01597
3rs19632657208935TG0.9680.99840.94530.02443034210633790.03102
3rs130915847380044TC0.9720.99860.94690.02369588344799720.04483
3rs67827187462776AG0.9780.99860.94920.02264227045469860.00295
3rs76348087207606AG0.9950.99860.94950.02250503092696370.02568
3rs105103517194432TC0.9760.99860.95060.02200219004126030.04154
3rs172884987115857AG0.9821.0020.95160.02154556663477140.01297
3rs19093977114094AT0.9730.99870.95270.02104383478240850.00073
3rs9841237326373TC0.8951.0060.95410.02040610415106960.01091
3rs38048807616515TC0.9880.99770.95450.02022406727031440.00658
3rs76355187665534AG0.9291.0010.95560.01972385892215970.02118
3rs68074427239585TG0.9990.99840.95730.01895194108682710.01383
3rs64430997295514TC0.9951.0010.95730.01895194108682710.01719
3rs98268197202825CG0.9570.99880.95810.01858915983411180
3rs76330407263365AG1.011.0010.9620.0168249279621870.01153
3rs76100737275601AG0.9771.0010.96630.01488802046064620.02176
3rs172350187187512CG0.950.9990.96660.01475320919713830.00299
3rs3406596881622TC0.3341.0030.97060.01295971302073330.00285
3rs98738987179286TC0.9581.0010.97160.01251249386690710.00488
3rs13964107334949AG0.9730.99920.97160.01251249386690710.04511
3rs98148817173602AG0.960.99910.9730.01188715973164810.00536
3rs99900137341352TG0.9830.99940.9770.01010543628122690.03711
3rs124976887176316TC0.9570.99920.97710.01006098671546440.00536
3rs15087207359636TG0.991.0010.97750.009883233932095580.00273
3rs1633256974802CG0.8851.0010.97910.009172949432521150.00197
3rs98767247127640AG0.9910.99950.98110.008286724286910540.00591
3rs3390156941491AG0.9330.99950.9820.007888512213050330.00255
3rs130960227465129AG0.9821.0010.98270.007579043947975830.00186
3rs170465166995832AC0.8240.99940.98440.006828394969235090.00024
3rs11563297405406AG0.9070.99940.98450.006784279525862980.01545
3rs20638807203869AG0.9480.99960.98720.005594853310833540.00021
3rs14001667193175AG0.9980.99970.98930.00467199092259040.01447
3rs98239967219509CG0.98610.99010.004320939488377820.0268
3rs67667427615440TC0.98310.99230.003357008644527530.00587
3rs178249747186490AC0.9570.99990.99530.002045995930597020.00307
3rs16057057265044AG0.99910.99550.001958735636571640.01309
3rs9788267453305TC0.9930.99990.99680.00139197068490567e-05
3rs76227497372946TC0.9870.99990.99720.001217730168264180.01343
Table Legend: Table of association results for SNPs across the selected gene (+10Kb upstream and downstream of the
union of the selected gene’s Refseq transcripts).

 

 

References

 

Major Depressive Disorder Working Group of the Psychiatric GWAS Consortium, Ripke S, Wray NR, Lewis CM, Hamilton SP, et al. A mega-analysis of genome-wide association studies for major depressive disorder. Mol Psychiatry. 2013 Apr;18(4):497-511. doi: 10.1038/mp.2012.21. Epub 2012 Apr 3. PubMed PMID: 22472876.