Metamoodics Gene Information

 

  Chromosome: chr7    Cytoband: q22.1    Gene: RELN

 

MD - Genomewide Association Studies for RELN


 

View in Genome Browser

 

Description

 
Shown here are the results for gene RELN from a mega-analysis of major depression carried out by the Psychiatric GWAS Consortium (PGC) of 9 GWAS studies. The total sample included 9,240 MDD cases and 9,519 controls all of European ancestry with data on ~1.2M genotyped and/or imputed SNPs.

 

Details of the methods for the mega-analysis are provided here.

 

 

Results Figure

 
Download:
   
Figure Legend: A regional plot of association findings around the selected gene (+/-10Kb upstream and downstream of the union of the selected gene’s Refseq transcripts). The X-axis shows the position along the gene, the left Y-axis shows the -log10(p-value) and the right Y-axis shows the recombination rate estimated from HapMap data. Each point represents a SNP. The index SNP with the best p-value is depicted by a diamond, and the linkage disequilibrium of neighboring SNPs with the index SNP is color coded.

 

 

Results Table

 
CHR Marker pos_bp (hg18) A1 A2 INFO OR SE -LOG(10)P RSQUARE
7rs736707102917639AG0.89720.02620.9814.46054750845054(Index SNP)
7rs17152161102928939TC0.9830.88990.000077074.113114641013990.68895
7rs13232021102928383AG0.9780.88990.000080684.093234110459270.68895
7rs13235135102928673AG0.980.89070.000091484.038673844065290.68895
7rs7808106102912821TC0.9750.89530.000096574.015157768594720.82353
7rs3823990102920437TC0.9630.88940.00012523.902395671125590.64697
7rs2528873102923338AC0.9681.1130.00015953.79723931260680.80959
7rs2382688102891644AG0.9881.0950.00039193.40682473652190.54736
7rs2299331102953058AG0.9890.92350.00049683.303818412831480.7364
7rs10262559102945263CG0.9870.91030.00059213.2276049389180.53727
7rs10282605102949606TC0.9890.91450.0010122.994819487496220.51046
7rs4727570102921911AG0.9941.0760.0013572.867420152340260.67883
7rs3808050102901332TC0.9540.92430.0014192.848017604542530.47602
7rs123714103030728TC0.990.92820.001432.844663962534940.00149
7rs2711881102922667TC0.9951.0750.0014742.831502516476970.67883
7rs10233848102909881AG0.9510.92780.0015242.817015032996420.51548
7rs362695103057249AG0.9910.92960.0015362.813608784304510.00099
7rs10245257103065707AG0.9891.0750.0017952.745935547085660.00099
7rs12536415102950788AC0.9911.0760.0018742.727230413448240.5911
7rs2249372103025446AG0.9870.92980.0019032.720561211712980.00118
7rs2075040102950083TC0.9911.0760.0019332.713768145971450.5811
7rs2528867102947578AG0.9731.0690.0027482.560983271612490.70684
7rs362721102978664TC0.8370.93280.0028772.541060138109670.34507
7rs2159677103028701TC0.9921.0680.0034852.457797217565970.00043
7rs2109697103020445AG0.9781.0720.0035822.445874418486990.00149
7rs2711846102939733TG0.9861.070.0036122.442252258358530.65471
7rs3808036102940609AG0.9760.92720.0036792.434270212168870.48157
7rs2229864102942941AG0.9760.93780.0040462.392974121565210.6778
7rs123712103018526AC0.9771.0710.0042512.371508895032880.00149
7rs362644103039099AC0.9870.9410.0043972.356843534380293e-05
7rs362642103037107TC0.9950.94140.0045152.345342245350480.00024
7rs2528863102943213AC0.9820.93910.0047992.318849250067580.67883
7rs1008126102962680TC0.9880.93830.0053692.270106596036760.51835
7rs2528864102943490CG0.9711.0730.0060372.219178824146530.45832
7rs362706102963201TC0.9320.9320.0061352.212185432936980.39905
7rs2237631103101580TC0.9810.94340.0070582.151318345976050.00768
7rs362646103063039TC0.9890.94450.0073832.131767131577540.00146
7rs10272602103375108TC0.9541.0590.010821.965772739229450.00026
7rs362626103004455AC0.9430.94020.010961.960189445851650.00042
7rs3808035102940698AC0.8141.0640.011321.946153573147750.27749
7rs10247439103143532AG0.9610.94350.012151.915423722065670.00468
7rs2245617103016271TC0.9440.93710.012381.90727935531590.00139
7rs2098178103015074AG0.9421.0630.012571.900664722314040.00015
7rs2711870103014143TC0.9410.9410.012821.89211197481726e-04
7rs876425103371937TC0.9611.0570.014371.842543231865770.00019
7rs2299355103088071TC0.9870.94850.016141.792096469613950.00682
7rs2711838102964121TC0.9841.0590.016411.784891418946910.36608
7rs362737102963812TC0.9840.94490.016711.777023550106610.37398
7rs2237626102964549TG0.9840.94520.017361.760450279159530.37605
7rs2299356103097058AG0.970.95010.017791.749824051916080.00607
7rs2073557103091593AG0.990.95080.01931.714442690992230.00458
7rs362710102965183TC0.9840.94640.020071.697452627512510.37605
7rs6958081103079061TC0.9861.0520.020571.686765708305280.00011
7rs2283022103091012TC0.9890.95140.021091.675923420260510.00458
7rs727708103118180TC0.9870.95380.026191.581864501574770.0063
7rs2073559103106160TC0.9851.0470.029061.5367043900380.00986
7rs6975369103376427TC0.9230.94150.029751.526513029935430
7rs10265101103140978AG0.9921.0470.031761.498119506244940.00381
7rs10435337103117920TG0.9771.0510.039421.404283380056580.001
7rs4236562103373426TC0.9620.94520.039531.403073185657030.00128
7rs3808018103362557AT0.9181.0660.043831.358228529346040.00143
7rs2041475102975297TC0.7920.9410.044421.352421445787540.16461
7rs2073558103106034AG0.9781.0470.04521.344861565188620.00189
7rs517761103156254TC0.990.95850.046141.335922409814930.00257
7rs10247465103143609AG0.990.95940.051161.291069464193380.00257
7rs12538423103117447TC0.9751.0440.065511.183692400568066e-05
7rs145527103068132TC0.9751.0430.07221.141462802430360.00189
7rs362632103020825TG0.9511.0430.073371.134481480925230.00352
7rs2215535103086101TC0.9721.040.075281.12332038958080.00685
7rs727531103088691TG0.9810.960.075781.120445399061030.00189
7rs362705103068820AG0.9671.0420.075921.119643800580760.00189
7rs1006817103043221AC0.9781.0410.07921.101274818410510.00189
7rs661492103185277TC0.7651.0520.088161.054728418492290.01619
7rs12540614103421085TC0.9780.96180.088831.051440337891040.00041
7rs10277802103349787AG0.951.1540.093031.031376979043010.00793
7rs6971140103400356CG0.9980.96340.095571.019678413991240.00063
7rs580884103158552TG0.9710.95620.095991.017774008325330
7rs1705109103181910AC0.7841.0410.09621.016824927962190.00766
7rs7785983103399868TC0.9970.96360.097371.01157482999370.00063
7rs12705155103182035AG0.7840.96090.097761.009838807101520.00489
7rs362771102976124TC0.8311.1080.099241.003313244399830.09412
7rs4425676103399138AG0.9741.0380.10110.9952488444089990.00019
7rs492063103182588TC0.670.95770.10290.9875846252375670.01131
7rs7800855103415046AG0.9810.96320.10310.9867413347164839e-05
7rs362784102978076AG0.8321.0450.10510.9783972839717580.1568
7rs4621738103408787AG0.9971.0360.11280.9476909003526770.00025
7rs7787675103404113TC0.9981.0360.1150.9393021596463880.00063
7rs7808549103370996AG0.9330.95650.1170.9318141382538380.00365
7rs2237628103009542TC0.9350.96720.12750.8944898152300260.00028
7rs10487175103360382AC0.9471.1380.130.8860566476931630.00665
7rs362813103002176TC0.9370.96830.14060.8520146793161950.00028
7rs362780102977594AG0.931.0880.14390.8419392060633950.0642
7rs2283029103185455TC0.9950.95940.1490.8268137315877260.00559
7rs17157903103415272TC0.9871.0460.14950.8253588073395520.0241
7rs6961175103426344TC0.9370.96630.15220.8175853475654460.00032
7rs6954870103357909TC0.980.96990.15330.8144578451456250.00707
7rs6954835103357837TG0.9790.97020.15850.799970733446230.00707
7rs2299378103160269TC0.9881.030.16560.7809396675511390.00312
7rs541768103163156AG0.9951.030.16730.7765040590376050.0124
7rs4729942103377521TC0.9481.0320.17110.76674999045890
7rs3808039102938672TC0.9750.92450.17280.7624562618571260.103
7rs3779521102946869AG0.9740.92470.17430.7587026128900070.103
7rs17157128103325569AG0.9950.95080.17570.7552282385047050.00389
7rs12154738103352968TC0.9780.97140.17610.7542406440327230.00707
7rs649310103179654AG0.9580.97110.18130.7416021959044910.01539
7rs17157125103325464AG0.9461.0510.18290.7377862945235830.00389
7rs2075044102968252TC0.8581.0820.18640.7295540919820370.103
7rs7798414103147016TC0.980.96840.18650.7293211638552941e-05
7rs634500103178645TC0.9640.97190.19140.7180580665591750.01724
7rs478549103162275TC0.9940.97280.1930.7144426909922260.0124
7rs2299374103148521TC0.9791.0320.19680.7059749059046771e-05
7rs6953960103160746AT0.9930.97310.19820.7028963498507430.0124
7rs17154438103127334AG0.9930.96070.19850.7022394889008660.00076
7rs362805102995292CG0.8820.96980.19990.6991872058818830.00368
7rs2299372103146701AG0.980.96950.20120.696372023616111e-05
7rs362732102997304AG0.9330.97090.20430.6897316333675520.00552
7rs2283028103159196TC0.9391.0320.20430.6897316333675521e-05
7rs2283027103158780TC0.9351.0320.20790.6821455106685319e-05
7rs12540537103149994TC0.981.0310.21030.6771607273136791e-05
7rs12674323103049921TC0.9511.0540.21370.6701954778359310.00041
7rs607755103177190AG0.9640.97360.21410.6693833327055620.01375
7rs2528858102938847AG0.9680.94380.21660.6643415477106980.16547
7rs2299375103157918TC0.9761.030.21740.6627404602497241e-05
7rs6951651103331139CG0.9621.0270.22080.6560009309428390.00676
7rs1858782103131063TC0.9971.0380.22940.6394065864347510.00122
7rs975743103157152TG0.9771.030.23050.6373290702743331e-05
7rs4298437103413113TC0.9910.97410.23430.6302277114030370.00075
7rs3808030102945221CG0.9810.93310.23690.6254349392772350.11195
7rs2283023103123571AC0.9710.96430.24790.6057234732321790.00202
7rs507226103179110AG0.9271.0260.2480.6055483191737840.02274
7rs3808027103048881TG0.9860.97130.24880.6041496239812192e-05
7rs10953395103354761TC0.9590.96950.24980.6024075659618830.0395
7rs11766205103368036TC0.810.95090.25290.5970511706555950.00049
7rs2247776102986955AG0.8860.96190.260.5850266520291820.00776
7rs4729939103332528TC0.9730.97580.2640.5783960731301690.03228
7rs528528103176321TC0.9670.97630.2650.5767541260631920.00368
7rs622657103178239AG0.9751.0240.26590.5752816626684330.00858
7rs7809970103388770TG0.9871.0240.26730.5730010412434630.00244
7rs362806102996101TC0.9040.96290.26960.5692801121367180.00828
7rs802790103348648AG0.9571.030.27620.5587763257573880.03491
7rs16872603103222843AG0.9651.0360.2770.5575202309355510.02264
7rs4727581103383437CG0.9831.0230.28330.5477534254795630.00297
7rs4727580103383412TC0.9821.0230.28580.5439377755450490.00218
7rs802788103347852AG0.9740.97730.28770.5410601381096740.00389
7rs10487169103184694TC0.4320.92130.2880.5406075122407690.0147
7rs10953394103308149AT0.9721.0270.29060.5367043900379970.03126
7rs4639449103369042AG0.9551.0240.29710.5270973481963360.00538
7rs17157475103367682TC0.8760.96650.30230.5195618528221831e-05
7rs6966089103426992AG0.970.97780.30310.5184140636323780.02237
7rs362726102994470TC0.9390.97760.3110.5072396109731630.00968
7rs6950391103390766TC0.9931.0220.3120.5058454059815570.0103
7rs362746102966831AG0.9560.92990.31660.4994890894736630.05913
7rs6965133103368862AG0.9811.0270.31920.4959371173213080
7rs39379103266305AC0.9890.97290.32030.4944430613361780.01777
7rs3735630103361697TC0.9650.9790.32650.4861168143889070.02788
7rs6951875103419411AG0.9611.0210.33560.4741780478433370.00996
7rs2299367103119946TG0.9911.0330.3390.4698003017969180
7rs10272734103410093TC10.98020.34260.4652126413705080.00755
7rs475880103184609TC0.550.96380.34370.4638204678627750.09854
7rs2256670102954911AG0.9911.030.35080.4549404153059970.09464
7rs11761011103226776TC0.8161.0420.35120.4544454927659350.00139
7rs17133124103298853TC10.97180.35160.4539511335982667e-05
7rs722278103382599AC0.9840.98040.35270.452594540332510.00853
7rs12666897103113430TG0.9810.97750.35480.4500163888403110.00979
7rs362803102994747TG0.310.029330.35530.4494047925106720.00112
7rs10251700103386490AG0.9780.96340.3560.4485500020271250.00341
7rs12705169103364124TG0.9711.0210.35760.446602489876120.05776
7rs4358742103401111TC11.0190.36030.4433357378774320.00755
7rs10487180103406534AC1.011.0270.36120.4422522583585320.01968
7rs12705148103121840AG0.9760.9780.370.4317982759330050.00807
7rs4460306103408368AC0.9970.98130.37170.4298074389042740.00512
7rs17133142103299637AG0.9181.0290.37530.4256214355869180.00254
7rs10244615103407019TC1.011.0260.37820.4222784754909790.01968
7rs10231612103344096TC0.8610.9170.38020.4199878874705760.00665
7rs1510858103280144AG0.9710.97850.38260.4172550343087230.03126
7rs12705140103112840TC0.9770.97870.38260.4172550343087230.00979
7rs6949488103364223TG0.9820.98150.38270.4171415377755010.03026
7rs6967257103364235AG0.9710.98140.38320.4165744995934930.02788
7rs10953399103400675TG1.011.0260.38880.4102737437457630.01968
7rs10266480103362925TC0.9710.98170.38950.4094925379914170.02788
7rs2237636103199720TC0.9841.0230.39150.4072682336060380.04069
7rs10256985103410022TC11.0180.39180.4069355683412820.00755
7rs3819453103139813TC0.9850.96540.39940.3985919394653163e-05
7rs4446675103184569CG0.4781.0540.40280.394910538118420.01434
7rs2237635103199687CG0.9721.0180.40920.3880643749598770.01649
7rs12705170103368507AG0.8010.97770.40940.3878521616735130.01449
7rs2017179103042380TC0.9581.0210.410.3872161432802640
7rs2256504102953131TC0.9920.97440.41170.3854191330025140.0779
7rs3819489103210000AG0.991.0220.41250.3845760471140560.0331
7rs10230291103379058TC0.9230.9750.41360.3834194699141140.00014
7rs16872014102943168TC0.9520.95560.41570.3812199754937850.00665
7rs2240965103081541TC0.9630.97980.41610.3808022842070530.00283
7rs16872018102943265AG0.9621.0460.41850.3783045376707210.00671
7rs4556029103374923AC0.9531.0180.42090.3758210742519780.00078
7rs2299379103160287TC0.9490.98270.42380.3728390476252240.00118
7rs3905915103325638AG0.9781.020.42670.3698773571406880.04542
7rs17321820103298641TG0.8760.96770.43620.3603143387573198e-05
7rs7790872103237509AG0.9730.9760.43710.3594191935103470.01957
7rs10227303103314719AT0.9671.0190.44730.3494011018273430.00309
7rs17152635102961961TC0.9871.0360.45010.3466909870615210.01146
7rs3808044102908284TC0.9791.0350.45020.3465945093354990.01504
7rs13233227103237911TC0.9891.0170.45120.3456309090247140.02152
7rs12672733102946807CG0.9940.96640.45220.3446694419906590.01383
7rs3914132103314605TC0.9851.020.45830.3388501427552130.02365
7rs17313716103388618AG0.9731.0160.46130.3360165453917330.00045
7rs2075039102949958AG0.9931.0340.46380.3336692556980310.01383
7rs7341475103192051AG0.9480.97910.46590.3317072895517795e-05
7rs39339103247171TG0.9940.98110.46720.3304971658956570.00545
7rs6465944103320636AC0.9680.9810.47140.3266104218116950.02374
7rs2106173103121792TC0.9951.0240.47220.3258740172572920.00058
7rs39350103254503TC0.9811.0160.4740.3242216583259154e-05
7rs39342103249811TC0.9820.98130.47510.3232149695807950.00272
7rs3914129103314101TC11.0170.47740.3211175853292640.0457
7rs2157748103122021AT0.9961.0230.48670.3127386537564940.00097
7rs11761756103319019AT0.9791.0190.48780.3117582040222880.02452
7rs12536007103268924CG0.9811.0320.48930.3104247842400620.0237
7rs17152154102928587AG0.9411.0430.49120.3087416418668890.03138
7rs3735631103136531CG0.9950.97780.49430.3060093895392230.00137
7rs362725102992853AG0.9580.9840.4950.3053948010664310.00138
7rs1510846103208938TC0.9851.0160.49920.3017254233256320.00271
7rs17151558102919591TG0.930.97680.50040.3006826989786180.03596
7rs12667402103423649AG0.540.91780.50360.2979142785641750.00017
7rs39335103240805TC0.9871.020.50570.2961070463674550.02249
7rs262354103212404TC0.9730.98520.51320.2897133522971090.00209
7rs7797395103342506TC0.9630.9810.51790.2857540889821060.01171
7rs10272697103345054TG0.9750.98110.51890.2849163293050730.01171
7rs9641319103314684TC0.9950.98510.52050.2835792661534450.0457
7rs2299395103316276AG0.9841.0290.52360.2810003621212820.01287
7rs3808019103362409TC0.8271.0280.52380.2808345059107870.00168
7rs10487171103188408TC0.9630.98280.52480.2800061736323960.03584
7rs2106172103121724TC0.9940.97940.52670.2784366816425190.00097
7rs362766102974750AT0.9320.96530.53010.2756421957735730.0068
7rs12705150103143511TC10.98250.53090.2749872746588435e-05
7rs2237637103211834TC0.9831.0140.53750.2696215314123570.00893
7rs17269079103321524TC0.9890.98690.53940.2680890578831280.02177
7rs12666749103387806TC0.9681.0190.54740.2616952069258950.0021
7rs10235072103082890TC0.9290.94010.55080.2590060684151140.00339
7rs3857816103323216AG0.9880.98730.55220.2579035976967560.02556
7rs3735629103361871TC0.9580.98750.56090.2511145599904830.03529
7rs7811777103324060AG0.9840.98760.56270.2497230848460070.02331
7rs10235411103045884AG0.9910.9830.5630.2494916051486540.00028
7rs4729937103319894CG0.9910.98810.57630.2393513804186440.02641
7rs2214943103190535AT0.9610.98490.57630.2393513804186440.03584
7rs6960627103359124TC0.9971.0120.57860.2376215706880360.05832
7rs9656085103306334CG0.9840.98130.580.2365720064370630.04493
7rs16872658103256105CG0.9661.0170.58380.2337359093480040.00045
7rs11981312103077093TC0.9831.0120.58850.2302535328205470.00118
7rs12666169103386980TC0.9641.0170.59020.2290007948360590.00109
7rs977638103047037TC0.9721.0180.59270.2271650727609820.00011
7rs1510857103272991AG0.9940.9820.5950.225483034271450.04547
7rs661575103185343TC0.8561.0140.60.2218487496163560.02727
7rs17152191102930353AC0.9911.0180.6060.2175273758337140.03019
7rs10487172103189479TC0.9531.0130.61030.2144566300434070.00612
7rs7794418103385789AG10.98480.61070.2141720800041340
7rs1877109103285731AC0.9960.98280.61180.213390527351340.04976
7rs6943822103385907TC10.98930.61290.212610378647890.00378
7rs4727582103386042AG10.98930.61290.212610378647890.00265
7rs4727583103386180AG10.98940.6150.2111248842245830.00265
7rs7805541103388493AC0.9150.98380.61760.209292712672320.01926
7rs1848959103268966AC0.9960.98310.6180.2090115249111840.04976
7rs7794238103385620AT0.9740.98490.62940.2010732614227980.0021
7rs720078103070249TC0.9791.0140.63110.1999018198252240.00442
7rs39334103240335AC0.9891.0110.63450.1975683735692760.0027
7rs10257108103065233TC0.9930.98640.63570.1967477885695430.00018
7rs362719102973113AC0.9590.98670.63780.195315485093060.00737
7rs10487160102962491TG0.9720.98120.63870.1947030838420150.04201
7rs262368103243408TC0.9670.96580.64040.1935486767527380.0032
7rs10233074103276290AG0.9910.98440.64520.1903056412830760.04976
7rs10262803103276264AG0.9921.0160.64570.189969213594160.04976
7rs17157216103336023AG0.9520.98590.64690.1891628488595120.01136
7rs262336103191779AG0.8321.0360.65080.1865524557351798e-04
7rs10235665103384192AC0.931.0250.65820.1816421220416450.05988
7rs6975344103411173AG0.9991.0090.66050.1801271780494540.00095
7rs11760725103356703AG0.9960.99020.6630.1784864715952270.05776
7rs362631103020561AG0.9610.98830.66420.1777011287376340.00455
7rs362698103064528TC0.9970.9880.67610.1699890640638820.00038
7rs579030103183840TC0.5790.98830.68410.164880409575450.00012
7rs7796597103364813TC0.9380.98640.68780.1625378285140050.00164
7rs1860686103079680TC0.9581.0120.69350.1589535345906960.00081
7rs17310949103308119TC0.9961.0110.69450.1583277499263660.00258
7rs13225455103245025AC0.9861.010.69470.1582027011256450.00138
7rs802787103336960TG0.9610.99130.69960.1551501991933610.04109
7rs362794102988499TC0.9630.99060.70060.1545298670183260.00011
7rs12705172103388220TG0.9631.0080.70510.1517492853229580.00192
7rs82878103018501TC0.9520.98980.70520.1516876963727160.00144
7rs17154414103125453TC0.9770.97940.71580.1452083059460142e-05
7rs665251103166720AT0.950.98960.72410.1402014525194340.0107
7rs476736103168659TC0.951.0110.72540.1394224487555840.0107
7rs638355103165298AG0.9510.98970.72570.1392428769184580.01108
7rs39343103251234TC11.0090.72610.1390035632428040.00723
7rs2528865102944611TC0.990.98940.7310.136082623042140.01461
7rs2073553103070457AG0.9790.98080.73120.1359638172742250.00033
7rs17269500103345373AG0.9771.0110.73220.1353702754544880.00757
7rs39346103253504AG0.9671.010.73780.1320613491092150
7rs497536103175234AC0.9510.99010.73850.1316495003520320.01108
7rs264372103253294TC0.981.0070.74240.1293620367891940.00873
7rs3857819103334371AG0.9580.98950.74410.1283686954624467e-04
7rs997447103052612TC0.9780.99040.74670.1268538486717440.00442
7rs10248053102951889TC0.9840.99110.75450.1223407558883910.04977
7rs1476928103347089CG0.9751.0090.77030.1133401021387970.00757
7rs155333103226350TC0.981.0070.77070.1131146410139910.00223
7rs6964157102985487AC0.9341.0070.77250.1121015119031280.00064
7rs262365103245053AG0.9961.0060.78130.1071821756904240.01009
7rs2535764102979768TC0.8080.99270.78280.1063491830140360.00017
7rs17149266102901195TC0.9371.0130.78310.1061827760325370.02244
7rs2075042103081683CG0.9810.98470.78510.1050750226404570.00033
7rs11979177103175126AG0.8610.98850.7960.0990869322623310.02351
7rs9986961103294906AC0.9921.0060.79640.09886874864462810.00086
7rs12672946103212886AC0.2080.66990.79730.09837823590664280.00829
7rs264375103251554TC0.9870.99230.79760.09821485469640073e-04
7rs3025970103065858AG0.9830.98590.80190.09587978652380030.00033
7rs2528866102944746AC0.9861.0090.80450.09447395156495160.02141
7rs13223714103277656TC0.9950.99410.80470.09436599867304530.0204
7rs141473103194962TC0.9721.0060.80660.09334178232840020.01469
7rs17153873103062253TC0.980.98630.80670.0932879430570360.00033
7rs39395103276965AG0.9971.0050.80740.09291125492570440.01922
7rs262359103249145TC0.9811.0050.81030.09135416109288670.01091
7rs17149018102899189TG0.9251.0110.81360.08958906008531180.02244
7rs12533473103427057TC0.8870.99370.82410.08402008585977560.02494
7rs362723102980018TC0.4291.0140.82790.08202211740709170.0358
7rs745541103209892AG0.9871.0050.83640.07758597585436570.00418
7rs13232645103283932AG0.991.0060.83890.07628980560343720.00105
7rs2299394103299179AG0.9930.99410.83970.07587584681417520.00105
7rs262378103237813AG0.9691.0150.840.07572071393811830.00036
7rs4729932103226116TC0.9960.9950.84020.07561732279802680.04846
7rs663302103185721AC0.8910.99540.84320.07406940213152860.00622
7rs1963647103231266TC0.9960.99520.84390.07370901311513660.04846
7rs1404431103223839TC0.9990.99520.85290.06910188558989540.04798
7rs694894103184640AG0.7680.99540.85910.06595628096447460.0226
7rs362777102977433TC0.8760.99380.86380.06358680028852030.02493
7rs4729931103226078TC0.9970.99570.86820.06138021849731890.05728
7rs262344103206573AG0.2551.1070.87050.060231224546650.00829
7rs6950645103360672AG0.9531.0040.87420.05838919784636620.00129
7rs39401103282629AG0.9851.0030.88360.05374429280060275e-05
7rs3819477103183899AG0.6891.0080.88430.05340037498486730.00319
7rs11496125103204793TC0.9830.99690.88450.05330216275425810.01144
7rs10487167103162673TC0.851.0080.8850.05305672930217464e-05
7rs17155888103203531AT0.9820.99690.88590.05261529831525910.01151
7rs1705107103190312TC0.9691.0030.88660.05227227303668430.01005
7rs39327103231907AG0.9831.0040.89040.05041484867334810.00877
7rs2072404103080161AC0.9630.99330.89330.0490026660111950.00264
7rs2283034103305285TC0.9791.0040.89490.04822549191827490.00105
7rs17152313102941079TC0.9630.99470.89790.04677202844014620.06339
7rs2299381103205235TC0.9841.0030.89870.04638525830935950.01144
7rs7809688103291814TC0.9861.0030.90780.04200982159316970.0017
7rs262342103206219AG0.991.0030.91220.03990993209508050.00282
7rs2299383103206082TC0.9840.99760.91310.03948165721929210.01144
7rs2237625102961498AG0.981.0030.91960.03640103740275860.00692
7rs17151768102921523AG0.9921.0030.91970.03635381351515660.01552
7rs39399103277228AG0.9940.99790.92070.0358818568485150.00086
7rs17156394103248833AT0.9871.0030.92220.03517488211661120.06982
7rs1062831102911443TC0.9680.99690.93110.03100367335168770.01637
7rs39353103255579TG0.9861.0020.9330.03011835625350010.00123
7rs3823992102907099TC0.9720.99750.93580.02881695914383860.01552
7rs886804103210071AC0.9831.0020.9360.02872415126189480.00432
7rs262334103198081TC0.9660.99790.93640.02853859497541330.00173
7rs39396103277111TC0.9941.0020.93770.02793608399197780.00086
7rs10278964102918890CG0.9370.99760.93820.02770457138886040.01186
7rs563264103153828AG0.9790.99760.93870.02747318213414430.00065
7rs499953103184902TG0.6371.0020.93920.02724191609646070.02589
7rs39359103257735AG0.9930.99850.94390.02507401391023760.00188
7rs955319103256439TC0.9931.0020.94830.02305424944075780.00018
7rs6951931103195522TC0.9311.0020.95550.01976930860896837e-05
7rs802786103333644AG0.9430.99860.95730.01895194108682710.01595
7rs2906642102898048AG0.870.99630.96180.01691522726221150.08529
7rs39369103262231TG0.9921.0010.96540.01529270551732680.00146
7rs10254420103330137TC0.9481.0010.96810.01407977987643260.01577
7rs39362103259189AC0.9931.0010.96870.01381070026317590.00188
7rs39366103260511TC0.9940.99930.97330.01175327662462160.00188
7rs262375103240293AG0.9450.99910.97450.01121815654635980.02311
7rs39367103260601TC0.9851.0010.97630.01041671068899480.00188
7rs39383103267479AG0.9941.0010.97710.01006098671546440.00146
7rs39365103260223AC0.9861.0010.9810.008330992620051490.00188
7rs39358103257456TC0.9930.99950.98230.007755855953228530.00188
7rs39363103259639AC0.9930.99950.98320.007358130121602330.00188
7rs2237642103307259TC11.0010.98430.006872514894289870.00348
7rs1476446103185189CG0.5541.0010.98430.006872514894289870.01127
7rs262340103205478AG0.98410.98520.00647559683293440.00638
7rs2237641103307007TC0.9941.0010.98750.005462895701502160
7rs2237643103308932TC0.99610.98820.005155150446602020.01852
7rs39387103273157TC0.9710.99970.98970.004496429734993680.00396
7rs3914126103292911AC0.98610.99460.002351545103793860.01293
7rs13233763103271612TC0.99310.99610.001697059901458840.00018
7rs3819466103178278TC0.8480.99980.99760.00104355952951387e-05
7rs2237640103306874AC0.9970.99990.99820.0007824344698964160.00327
Table Legend: Table of association results for SNPs across the selected gene (+10Kb upstream and downstream of the
union of the selected gene’s Refseq transcripts).

 

 

References

 

Major Depressive Disorder Working Group of the Psychiatric GWAS Consortium, Ripke S, Wray NR, Lewis CM, Hamilton SP, et al. A mega-analysis of genome-wide association studies for major depressive disorder. Mol Psychiatry. 2013 Apr;18(4):497-511. doi: 10.1038/mp.2012.21. Epub 2012 Apr 3. PubMed PMID: 22472876.